Preheat the oven to 350°F (175°C). Lightly grease a 6" x 7.5" baking dish.
In a bowl, toss the chopped apples with the cornstarch, brown sugar, cinnamon, nutmeg, lime juice, and vanilla until no dry cornstarch is visible. Spread evenly in the baking dish.
4 Cups Fuji apples, 1 tsp Cornstarch, 2 tbsp Brown sugar, 1/2 tsp Ground cinnamon, 1 pinch Ground nutmeg, 2 tsp Lime juice, 1 tsp Vanilla extract
In another bowl, mix the oats, almond flour, walnuts, brown sugar, cinnamon, and salt.
1/2 Cup Rolled oats, 1/2 Cup Almond flour, 1/2 Cup Walnuts, 3 tbsp Brown sugar, 1/2 tsp Ground cinnamon, 1/8 tsp Salt
Pour in the melted ghee and mix until everything is evenly moistened and looks like coarse, damp crumbs.
2 tbsp Ghee
Pile all the topping evenly over the apples.
Bake at 350°F for 55 minutes, until the topping is golden and the juices bubble in the center. If the top browns too quickly, cover loosely with foil.
Let the crisp rest for 25 minutes so the juices thicken. Serve warm with a scoop of vanilla ice cream.